Publications
Below is a full list of Dr. Pederson's publications. Publications on which CSUDH students are co-authors are marked with an asterisk.
2016
Singh, A., Tessier, M. B., Pederson, K., Wang, X., Venot, A.P., Boons, G.-J., Prestegard, J.H., and Woods, R.J. (2016) Extension and Validation of the GLYCAM Force Field Parameters for modeling Glycosaminoglycans, Can. J. Chem. 94, 927-935. DOI: 10.1139/cjc-2015-0606
2015
Everett, J.K., Tejero, R., Murthy, S.B.K., Acton, T.B., Aramini, J.M., Baran, M.C., Benach, J., Cort, J. R.,Eletsky, A., Forouhar, F., Guan, R., Kuzin, A.P., Lee, H.-W., Liu, G., Mani, R., Binchen Mao, Mills, J.L., Montelione, A.F., Pederson, K., Powers, R., Ramelot, T.A., Rossi, P., Seetharaman, J., Snyder, D., Swapna, G.V.T., Vorobiev, S.M., Wu, Y., Xiao, R., Yang, Y., Arrowsmith, C.H., Hunt, J., Kennedy, M.A., Prestegard, J.H., Szyperski, T., Tong, L., and Montelione, G.T. (2015) A Community Resource of Experimental Data for NMR – X-ray Crystal Structure Pairs, Protein Sci. 25, 30-45. DOI: 10.1002/pro.2774
Rosato, A., Vranken, W., Fogh, R.H., Ragan, T.J., Tejero, R., Pederson, K., Lee, H.-W., Prestegard, J.H., Yee, A., Wu, B., Lemak, A., Houliston, S., Arrowsmith, C.H., Kennedy, M., Acton, T.B., Xiao, R.,Liu, G., Montelione, G.T. & Vuister, G.W. (2015) The second round of Critical Assessment of Automated Structure Determination of Proteins by NMR: CASD-NMR-2013, J. Biomol. NMR. 62, 413- 424. DOI: 10.1007/s10858-015-9953-4
2014
Pulavarti, S.V., Janet, H.Y., Pederson, K., Acton, T.B., Xiao, R., Everett, J.K., Prestegard, J.H.,Montelione, G.T., and Szyperski, T. (2014) Solution NMR structures of Immunoglobulin-like domains 8 and 12 from Obscurin-like protein 1 contribute to the structural coverage of the human cancer protein interaction network, J. Struct. Funct. Genomics 15, 209-214. DOI: 10.1007/s10969-014-9185-y
Elshahawi, S.I., Ramelot, T.A., Seetharaman, J., Chen, J., Singh, S., Yang, Y., Pederson, K., Kharel, M.K., Xiao, R., Acton, T.B., Everett, J.K., Yennamalli, R.M., Wang, F., Prestegard, J.H., Lew, S., Tong, L., Montelione, G.T., Kennedy, M.A., Bingman, C.A., Zhu, H., Phillips, G.N., Jr., and Thorson, J.S. (2014) Structure-Guided Functional Characterization of Enediyne Self-Sacrifice Resistance Proteins, CalU16 and CalU19, ACS Chem. Biol. 10, 2347-2358. DOI: 10.1021/cb500327m
Pederson, K., Mitchell, D.A., and Prestegard, J.H. (2014) Structural Characterization of the DC-SIGN- Lewis X Complex, Biochemistry 53, 5700-5709. DOI: 10.1021/bi5005014
Prestegard, J.H., Agard, D.A., Moremen, K.W., Lavery, L.A., Morris, L.C., and Pederson, K. (2014) Sparse Labeling of Proteins: Structural Characterization from Long Range Constraints, J. Magn. Reson. 241, 32-40. DOI: 10.1016/j.jmr.2013.12.012
2011
Bardaro, M.F., Jr., Pederson, K., Drobny, G.P., and Varani, G. (2011). Investigating RNA and DNA Dynamics through Nuclear Magnetic Resonance. In Biomolecular NMR Spectroscopy (Dingley, A.J. and Pascal, S.M., eds.), pp. 279-301. IOS Press, The Netherlands.
2010
Pederson, K., Echodu, D., Emani, P., Olsen, G., Bardaro, M.F., Jr., Shajani, Z., Meints, G.A., Miller, P.A., Varani, G., and Drobny, G.P. (2010). Unifying Solution and Solid-State NMR Studies of Nucleic Acid Dynamics, eMagRes. DOI: 10.1002/9780470034590.emrstm1173
2008
Echodu, D., Goobes, G., Shajani, Z., Pederson, K., Meints, G.A., Varani, G., and Drobny, G.P. (2008). Furanose Dynamics in the HhaI Methyltransferase Target DNA Studied by Solution and Solid-State NMR Relaxation, J. Phys. Chem. B 112, 13934-13944. DOI: 10.1021/jp801723x
Pederson, K., Meints, G.A., Shajani, Z., Miller, P.A., and Drobny, G.P. (2008). Backbone Dynamics in the DNA HhaI Protein Binding Site, J. Am. Chem. Soc. 130, 9072-9079. DOI: 10.1021/ja801243d
Meints, G.A., Miller, P.A., Pederson, K., Shajani, Z., and Drobny, G.P. (2008). Solid-State Nuclear Magnetic Resonance Spectroscopy Studies of Furanose Ring Dynamics in the DNA HhaI Binding Site, J. Am. Chem. Soc. 130, 7305-7314. DOI: 10.1021/ja075775n
2005
Leskowitz, G.M., Ghaderi, N., Olsen, R.A., Pederson, K., Hatcher, M.E., and Mueller, L.J. (2005). The Amide Rotational Barrier in Isonicotinamide: Dynamic NMR and Ab Initio Studies, J. Phys. Chem. A 109, 1152-1158. DOI: 10.1021/jp0460689